Browse of TCMCG005C20223 protein

CDS

Accession Number	TCMCG005C20223
gbkey	CDS
Protein Id	XP_020270224.1
Location	join(5924012..5924021,5924103..5924146,5924232..5924298,5924408..5924570,5926663..5926885,5926983..5927039,5928618..5928761,5928844..5928924,5929257..5929344,5930059..5930396,5930574..5930649,5930751..5930944,5934489..5934652,5934742..5934814,5935269..5935382,5939081..5939161,5939281..5939340,5941215..5941298,5941395..5941537,5942056..5942149)
Gene	LOC109845381
GeneID	109845381
Organism	Asparagus officinalis

Protein

Length	765aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA376608;
db_source	XM_020414635.1
Definition	DNA repair helicase XPB1 isoform X2

EGGNOG-MAPPER Annotation

COG_category	KL
Description	DNA repair helicase
KEGG_TC	-
KEGG_Module	M00290        [VIEW IN KEGG]
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko00002        [VIEW IN KEGG] ko01000        [VIEW IN KEGG] ko03021        [VIEW IN KEGG] ko03400        [VIEW IN KEGG]
KEGG_ko	ko:K10843        [VIEW IN KEGG]
EC	3.6.4.12        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway	ko03022        [VIEW IN KEGG] ko03420        [VIEW IN KEGG] map03022        [VIEW IN KEGG] map03420        [VIEW IN KEGG]
GOs	GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005634        [VIEW IN EMBL-EBI] GO:0005737        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0009314        [VIEW IN EMBL-EBI] GO:0009411        [VIEW IN EMBL-EBI] GO:0009416        [VIEW IN EMBL-EBI] GO:0009628        [VIEW IN EMBL-EBI] GO:0010224        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0050896        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGGCAGACCGTGAAAGAGGTCGGCCGTCCAAAAAGCACAAGTCCTCGTCAAAAGCCGCTCAGGTTGTCGAAGAAGAAGAGCTCTATTTCGGAGAAGATTCGGATGATGATAGGCGACGAGGAGAGACGAAGAAGAACGACTTCACGAAGCTTGAGTTGAAGCCTGATCACGTTAACAGGCCCCTTTGGGCGTGCGGCGACGGCAGGATATTTCTTGAGACGTTTTCTCCTTTGTATAAACAGGCTTATGACTTCCTCATTGCCATTGCTGAGCCAGTGTGCAGGCCAGAGTCTATGCATGAGTACAACCTAACACCTCATTCTCTCTATGCTGCTGTGTCGGTTGGGCTTGAGACCGAGACAATCATAAATGTCTTAAACAAGCTATCAAAGACTAAGTTGCCGAAGGAGATGATAGATTTCATCCATGCTTCCACCGCCAATTATGGGAAAGTGAAACTCGTGTTGAAAAAGAATCGATACTTTGTGGAGTCACCTTTTCCGGAGGTGCTGAAGACATTGCTTAGGGATGATGTCATATCTCGTGCGAGGATTTGTTTTGAGGGTCATCATGAAGGTGGTTCATTTACAATTAGCAAAACGGCTGGAGAAATAGAAGGTGGCCATGATGAGTTGCTGAATGGTGTAGACTTAGCTGCTGCTGCGGAAGAGAAAGAAACACATTCCTTTGAAATTGATCCTGCCCAGGTTGAGAATGTGAAGCAAAGATGTTTGCCTAACGCCTTAAATTATCCTATGCTGGAGGAGTATGATTTTAGAAATGATACGGTGAACCCAGACTTGAACATAGAATTGAAACCGCAAGCACAACCTAGACCATATCAAGAAAAGAGTCTCAGCAAGATGTTTGGGAATGGAAGAGCAAGGTCTGGCATTATTGTTTTGCCTTGTGGTGCTGGAAAGTCTTTGGTTGGTGTCTCTGCGGCATGTCGAATTAAGAAGAGCTGTCTTTGCTTAGCTACCAACGCGGTCTCTGTGGATCAATGGGCTTTCCAGTTTCAGCTTTGGTCTAATATAAAGGACGAACATATTTGTCGGTTTACATCTGATAACAAAGAAAGATTTCGTGGCAATGCTGGTGTGGTTGTCACCACTTACAACATGGTTGCATTTGGTGGAAAAAGGTCTGAAGATTCTGAGAAAATCATTGAAGAAATAAGAAATAGAGAATGGGGTTTGCTTCTTATGGACGAGGTGCACGTTGTTCCTGCACACATGTTCCGGAAGGTCATTAGCATTACTAAGTCTCATTGCAAGCTTGGACTTACTGCAACACTAGTGAGAGAGGACGAACGTATCACAGATCTCAACTTTCTTATAGGACCAAAATTGTATGAAGCTAATTGGTTGGATTTGGTAAAAGGAGGGTTCATAGCTAACGTTCAGTGTGCTGAAGTGTGGTGCCCCATGACGAAGGAATTCTTTGCAGAGTATTTGAAAAGGGAAAATTCTAAAAAGAAGCAGGCACTTTACGTGATGAATCCAAACAAATTCAGAGCCTGTGAATTTCTGATTCGCTTTCATGAGCAACAACGTGGTGATAAGATTATTGTGTTTGCTGATAATCTTTTTGCCCTCACCGCATATGCAATGAAGCTACGGAAACCTATGATATATGGTGCAACCAGCCATGCTGAGAGGACAAGAATTCTTAAAGCATTCAAATGTAGCCCGGATGTTAATACAATTTTCTTATCTAAGGTGGGTGACAATTCGATAGATATTCCTGAAGCTAACGTGATAATACAAATATCATCTCATGCTGGTTCAAGACGTCAAGAAGCACAACGGCTGGGCCGTATTCTTAGGGCAAAGGGTCGGCTCCAAGACAGAATGGCCGGTGGAAAAGAAGAGTACAATGCCTTTTTCTATTCTCTAGTATCTACAGATACACAGGAGATGTATTACTCTACCAAAAGGCAGCAATTTCTGATTGACCAAGGCTACAGCTTTAAGGTGATCACGAGCCTTCCTCCTCCTGATTCAGGATCTGAGCTCAGCTTCCATACCCTACAGGAGCAACTTGACCTCCTCAGCAAGGTATTGAGTGCTGGAGATGATGTGGTTGGCTTGGAGCAGTTGGAAGAAGATGCTGATGACATTGCTCTACAGAAGGCCCGACGTTCTGTGGGATCAATGAGCGCTCTATCAGGAGCTAGCGGGATGGTGTACATGGAGTACAATACTGGCCAAGGCAAGAAGGGCCATGGCAAGAGTAAACCAAAGGACCCGGCAAAGAGACACCATTTGTTTAGGAAGCGCTATAGCCAAGCCTAG

Protein:   MADRERGRPSKKHKSSSKAAQVVEEEELYFGEDSDDDRRRGETKKNDFTKLELKPDHVNRPLWACGDGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIINVLNKLSKTKLPKEMIDFIHASTANYGKVKLVLKKNRYFVESPFPEVLKTLLRDDVISRARICFEGHHEGGSFTISKTAGEIEGGHDELLNGVDLAAAAEEKETHSFEIDPAQVENVKQRCLPNALNYPMLEEYDFRNDTVNPDLNIELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRIKKSCLCLATNAVSVDQWAFQFQLWSNIKDEHICRFTSDNKERFRGNAGVVVTTYNMVAFGGKRSEDSEKIIEEIRNREWGLLLMDEVHVVPAHMFRKVISITKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYLKRENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTAYAMKLRKPMIYGATSHAERTRILKAFKCSPDVNTIFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLGRILRAKGRLQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSLPPPDSGSELSFHTLQEQLDLLSKVLSAGDDVVGLEQLEEDADDIALQKARRSVGSMSALSGASGMVYMEYNTGQGKKGHGKSKPKDPAKRHHLFRKRYSQA